| distance | reference number | name | latitude | longitude |
| 3.9 | 2687 | Sausalito, Corps of Engineers Dock, San Francisco B | 37.865 | -122.493 |
| 4.3 | 2298 | Point Bonita, Bonita Cove, San Francisco Bay, Calif | 37.8167 | -122.533 |
| 4.3 | 652 | Corte Madera Creek, San Francisco Bay, California | 37.9433 | -122.513 |
| 4.8 | 2686 | Sausalito, California | 37.85 | -122.483 |
| 6.1 | 2329 | Point San Quentin, San Francisco Bay, California | 37.945 | -122.473 |
| 6.4 | 69 | Angel Island (west side), San Francisco Bay, Califo | 37.8667 | -122.45 |
| 6.7 | 2302 | Point Chauncey, San Francisco Bay, California | 37.8917 | -122.443 |
| 7.1 | 2647 | San Francisco, San Francisco Bay, California | 37.8067 | -122.465 |
| 7.4 | 2087 | Ocean Beach (outer coast), California | 37.7667 | -122.517 |
| 7.8 | 300 | Bolinas Lagoon, California | 37.91 | -122.682 |
| 8.3 | 70 | Angel Island, East Garrison, San Francisco Bay, Cal | 37.8633 | -122.418 |
| 8.4 | 1067 | Gallinas Creek, San Pablo Bay, California | 38.015 | -122.503 |
| 8.5 | 2645 | San Francisco Bar, California | 37.7667 | -122.633 |
| 8.8 | 2323 | Point Orient, San Francisco Bay, California | 37.9667 | -122.433 |
| 8.8 | 32 | Alcatraz Island, San Francisco Bay, California | 37.8333 | -122.417 |
| 9.0 | 2328 | Point San Pedro, San Pablo Bay, California | 37.99 | -122.447 |
| 9.2 | 2041 | North Point (Pier 41), San Francisco, California | 37.8167 | -122.417 |
| 9.6 | 2043 | North Point, Pier 41, San Francisco, San Francisco | 37.81 | -122.413 |
| 9.6 | 548 | Chevron Oil Company Pier, Richmond, California | 37.9283 | -122.4 |
| 9.6 | 2540 | Richmond, Chevron Oil Pier, California | 37.9283 | -122.4 |
| 11.5 | 2646 | San Francisco, Pier 22½, California | 37.79 | -122.387 |
| 11.9 | 2538 | Richmond Inner Harbor, San Francisco Bay, Californi | 37.91 | -122.358 |
| 12.0 | 2546 | Rincon Point, Pier 22½, San Francisco, California | 37.7833 | -122.383 |
| 12.5 | 2438 | Potrero Point, California | 37.7667 | -122.383 |
| 12.5 | 3407 | Yerba Buena Island, San Francisco Bay, California | 37.81 | -122.36 |